Information for 9-AAAGCCTTTAGCC (Motif 7)

C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T
p-value:1e-143
log p-value:-3.300e+02
Information Content per bp:1.530
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif44.59%
Number of Background Sequences with motif855.5
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets55.8 +/- 26.6bp
Average Position of motif in Background50.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAGCCTTTAGCC
-AAACMATTAN--
 C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAAGCCTTTAGCC
--ANCGTTTANN-
 C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAAGCCTTTAGCC
--NNCAATTANN-
 C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAAGCCTTTAGCC--
-NTGCCCTTGGGCGN
 C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C G T
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAAGCCTTTAGCC
---BCMATTAG--
 C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAAGCCTTTAGCC
--GGCCATTAAC-
 C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCTTTAGCC
AAAAACCATTAAGG
 A C G T C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AAAGCCTTTAGCC
--ACCGATTAG--
 C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAAGCCTTTAGCC
-AAGCTTG-----
 C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAAGCCTTTAGCC-
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T