Information for 20-GGTTCCCATAGGT (Motif 18)

A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C
p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.2 +/- 7.6bp
Average Position of motif in Background77.0 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTTCCCATAGGT
HTTTCCCASG---
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTTCCCATAGGT--
GGGTTACTANAGGTCA
 A C G T A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGTTCCCATAGGT------
---TCGCGAAGGTTGTACT
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTTCCCATAGGT-
GGTTGCCATGGCAA
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGTTCCCATAGGT-
----ACCATATGTT
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGTTCCCATAGGT
-----CCATATGT
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTTCCCATAGGT-
NGTTGCCATGGCAA
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RFX4/MA0799.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTTCCCATAGGT---
CGTTGCCATGGCAACN
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

RFX3/MA0798.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTTCCCATAGGT---
CGTTGCCATGGCAACN
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

RFX2/MA0600.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTTCCCATAGGT---
CGTTGCCATGGCAACG
 A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G