Information for 18-TTTCATGCCTTCG (Motif 15)

A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A C T G T A C G A T G C C G T A A C G T C T A G C T G A C G T A C G T A
p-value:1e-13
log p-value:-3.202e+01
Information Content per bp:1.902
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 26.3bp
Average Position of motif in Background24.2 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTCATGCCTTCG
NGANTTTTATGGCTCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTCATGCCTTCG
TTTTATGGCTN--
 A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATGCCTTCG
NTTTTATGAC----
 A C G T A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCATGCCTTCG
ANTAATTTTATGGCCGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TTTCATGCCTTCG
-------GCTTCC
 A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATGCCTTCG
NTTTTATTACN---
 A C G T A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTCATGCCTTCG
TTTTATTGC----
 A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATGCCTTCG
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATGCCTTCG
NAATTTTATTACCTNN
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATGCCTTCG
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A T C G A T G C A G T C A C G T A C G T G T A C A C T G
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T