Information for 17-CRTGAGAACTCAC (Motif 13)

A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C
Reverse Opposite:
C T A G A G C T A C T G C G T A A C T G C A G T C G A T A G T C A C G T G A T C C G T A G A T C C T A G
p-value:1e-16
log p-value:-3.746e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 23.4bp
Average Position of motif in Background59.4 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CRTGAGAACTCAC
TATCATTAGAACGCT-
 A C G T A C G T A C G T A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CRTGAGAACTCAC
---AAGCACTTAA
 A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CRTGAGAACTCAC--
NNNNTGAGCACTGTNNG
 A C G T A C G T A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CRTGAGAACTCAC
CSTGGGAAAD---
 A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CRTGAGAACTCAC--
NATTTAAGTACTTANNA
 A C G T A C G T A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CRTGAGAACTCAC--
CTTTAAGTACTTAATG
 A C G T A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CRTGAGAACTCAC-
ATAAATGACACCTATCA
 A C G T A C G T A C G T A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CRTGAGAACTCAC---
TTTTAAGTACTTAAATT
 A C G T A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CRTGAGAACTCAC----
AAGGCGAAATCATCGCA
 A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CRTGAGAACTCAC---
TTCNAAGTACTTNNNNN
 A C G T A G T C C T A G A C G T C T A G C G T A A C T G C G T A G T C A A G T C A C G T G T A C C T G A A G T C A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T