Information for 11-AGGTGTGAATTCTGAC (Motif 12)

C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
Reverse Opposite:
A C T G A C G T G T A C C T G A C A T G G T C A C T G A A C G T A C G T A G T C C G T A G T A C C G T A A G T C A G T C A C G T
p-value:1e-21
log p-value:-5.032e+01
Information Content per bp:1.764
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 27.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAATTCTGAC
AAGGTGTGAA-------
 A C G T C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAATTCTGAC
AGGTGTGAAA------
 C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAATTCTGAC
TAGGTGTGAAG------
 A C G T C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTGAATTCTGAC
GAAAAGGTGTGAAAATT---
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAATTCTGAC
AAGGTGTGAAAAT----
 A C G T C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAATTCTGAC
AGGTGTGA--------
 C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAATTCTGAC
AGGTGTGA--------
 C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAATTCTGAC
AAGGTGTGAAA------
 A C G T C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGTGTGAATTCTGAC
AGGTGTTAAT------
 C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAATTCTGAC
AGGTGTGA--------
 C G T A A C T G C T A G C G A T A C T G C G A T C T A G G T C A C G T A A G C T A C G T G A T C A G C T A C T G T G C A A G T C
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T