Information for 12-AGGCCTTGCC (Motif 19)

G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C
Reverse Opposite:
A C T G C A T G A G T C G C T A C T G A T A C G A T C G T G A C A G T C C G A T
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.825
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif438.0
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets50.5 +/- 30.4bp
Average Position of motif in Background47.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AGGCCTTGCC
AGGCCTNG--
 G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGGCCTTGCC
AGGCCTAG--
 G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTTGCC---
CAGGCCNNGGCCNN
 A C G T G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTGCC
BNTGDCCTTG--
 A C G T A C G T G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGCCTTGCC
TGACCTTGAN
 G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGCCTTGCC--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGCCTTGCC
TGACCTTGAV
 G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGCCTTGCC--
-NNACTTGCCTT
 G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTGCC---
GCTGACCTTGAACTN
 A C G T A C G T G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGCCTTGCC--
TGACCTTGACCT
 G C T A A C T G A C T G A T G C A T G C A G C T C G A T C T A G G T A C A G T C A C G T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T