Information for 8-CTCGCCAAGATTA (Motif 11)

A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A
Reverse Opposite:
A C G T G C T A G T C A A G C T A G T C A C G T A C G T A C T G A C T G A G T C A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.476e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 19.8bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCGCCAAGATTA--
-TTGCCCGGATTAGG
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A A C G T A C G T
A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTCGCCAAGATTA-
------RGGATTAR
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCGCCAAGATTA
--TGCCAA-----
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCGCCAAGATTA
CGTGCCAAG----
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CTCGCCAAGATTA-
------NGGATTAA
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTCGCCAAGATTA--
-----VRGGATTARN
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCGCCAAGATTA
-----CAAGCTT-
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CTCGCCAAGATTA--
-------AGATAASR
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTCGCCAAGATTA----
-TCGCGAAGGTTGTACT
 A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

E2F7/MA0758.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTCGCCAAGATTA
TTTTCCCGCCAAAA---
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C T A G A G T C A G T C C G T A C G T A A C T G C T G A A C G T C G A T C G T A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T A C G T