Information for 3-AAGTGGGTAC (Motif 8)

T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
Reverse Opposite:
A T C G G C A T T C G A G T A C G A T C A G T C C G T A A T G C A G C T A C G T
p-value:1e-7
log p-value:-1.642e+01
Information Content per bp:1.700
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif5.14%
Number of Background Sequences with motif362.7
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets45.8 +/- 22.2bp
Average Position of motif in Background48.8 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGGTAC
NTCAAGTGGN---
 A C G T A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGGGTAC
TTAAGTGGT---
 A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:3
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGGTAC-
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGGTAC
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGGGTAC
TTAAGTGGN---
 A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAGTGGGTAC
TTRAGTGSYK--
 A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGGTAC
NTCAAGTGG----
 A C G T A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGGTAC-
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGGTAC
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGGTAC
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A C G C G A T C T A G C T A G C A T G A G C T C G T A T A G C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A