Information for 4-GKSTYCWAGTGYY (Motif 7)

A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C
Reverse Opposite:
C T A G C T A G A G T C C T G A A G T C A C G T C G T A A C T G C T A G C G T A A T G C G T A C A G T C
p-value:1e-7
log p-value:-1.762e+01
Information Content per bp:1.823
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 8.8bp
Average Position of motif in Background34.3 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GKSTYCWAGTGYY
---NTCAAGTGG-
 A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GKSTYCWAGTGYY
---NTCAAGTGGN
 A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GKSTYCWAGTGYY-
----TTRAGTGSYK
 A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GKSTYCWAGTGYY
---CTYRAGTGSY
 A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GKSTYCWAGTGYY---
NANTTTCAAGTGGTTAN
 A C G T A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GKSTYCWAGTGYY
BCNGGTTCTAGANCN
 A C G T A C G T A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GKSTYCWAGTGYY-
----TTGAGTGSTT
 A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GKSTYCWAGTGYY
---BTBRAGTGSN
 A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GKSTYCWAGTGYY-
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GKSTYCWAGTGYY-
----CCATGTGCTT
 A C T G A C T G A T C G A C G T A G T C A G T C G C A T C G T A A C T G A G C T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T