Information for 1-CAAGTCTGAT (Motif 5)

A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A C G A T A G T C G T C A A C T G C G T A A T G C C G A T A C G T A C T G
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.891
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif53.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets47.2 +/- 33.3bp
Average Position of motif in Background56.0 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-TWGTCTGV-
 A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-AGGTGTGA-
 A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAGTCTGAT
-NNNANTGA-
 A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAGTCTGAT
VBSYGTCTGG-
 A C G T A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAAGTCTGAT----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-AGGTGTGA-
 A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-CTGTCTGG-
 A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT
-AGGTGTGA-
 A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGAT--------
-TAAACTGATAAGAAGAT
 A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAAGTCTGAT-
CATGACTCATC
 A G T C C G T A C G T A A T C G C G A T A G T C A C G T A C T G C G T A A C G T A C G T
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C