Information for 2-TAAGTGGCAAAGT (Motif 4)

A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T G C A C G T A C G T C G T A
p-value:1e-9
log p-value:-2.148e+01
Information Content per bp:1.892
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets80.2 +/- 13.1bp
Average Position of motif in Background64.3 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGGCAAAGT
TTAAGTGGT-----
 A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGGCAAAGT
NTNNTTAAGTGGNTNAN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGGCAAAGT
TTAAGTGGN-----
 A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGGCAAAGT
NTNNTTAAGTGGTTANN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGGCAAAGT
TTAAGTGC------
 A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAAGTGGCAAAGT
NTCAAGTGGN-----
 A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TAAGTGGCAAAGT
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAAGTGGCAAAGT
----TGGAAAA--
 A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGGCAAAGT
AATNTTAAGTGGNTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TAAGTGGCAAAGT
--NATGGAAAAN-
 A C G T C G T A C G T A A T C G A C G T A C T G A C T G G T A C C G T A C T G A C G T A A T C G A C G T
A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T