Information for 1-AKTKTGCMCMATT (Motif 2)

C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A T C G A C G T A C T G A G T C C G T A G T C A C G T A G T A C C G A T
p-value:1e-10
log p-value:-2.426e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 18.3bp
Average Position of motif in Background37.3 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AKTKTGCMCMATT--
GGGTGTGCCCAAAAGG
 A C G T C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AKTKTGCMCMATT
--ATTGCACAATA
 C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AKTKTGCMCMATT
--GTTGCGCAAT-
 C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T
A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AKTKTGCMCMATT-
NTNTATGTGCACATNNN
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AKTKTGCMCMATT
---TTGCAACATN
 C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AKTKTGCMCMATT-
NNGTATGTGCACATNNN
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AKTKTGCMCMATT----
---NNGCACCTTTCTCC
 C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AKTKTGCMCMATT-------
---TGTTCCCATTGTGTACT
 C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AKTKTGCMCMATT--
-------GCAATTAG
 C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AKTKTGCMCMATT
-GTGGGCCCCA--
 C G T A A C T G A C G T A C G T A C G T A C T G A G T C G T C A A T G C G T A C C G T A A C G T A C G T
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T