Information for 1-TTGGGCCATG (Motif 5)

G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G
Reverse Opposite:
G A T C G C T A C G A T C T A G C A T G A T G C G A T C G T A C G C T A C T G A
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.687
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif11.04%
Number of Background Sequences with motif1781.2
Percentage of Background Sequences with motif3.61%
Average Position of motif in Targets52.6 +/- 25.5bp
Average Position of motif in Background49.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTGGGCCATG--
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGCCATG---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGGGCCATG
--AGGCCTAG
 G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTGGGCCATG
--AGGTCA--
 G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTGGGCCATG--
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

TP63/MA0525.2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TTGGGCCATG--
AACATGTTGGGACATGTC
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G A C G T A C G T
C T G A C T G A A G T C C T G A G C A T A C T G G A C T G A C T T C A G A C T G C T A G C T G A A G T C C G T A G A C T A C T G G A C T G T A C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGGGCCATG
AAYTAGGTCA--
 A C G T A C G T G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTGGGCCATG------
--GTGCCACGCGACTG
 G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGCCATG
NRRGGGTCTT-
 A C G T G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGCCATG
GATGAGTCATN
 A C G T G A C T C G A T C A T G C T A G T A C G G T A C G A T C G C T A C G A T C T A G
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G