Information for 4-TCTGGCAGCAAAG (Motif 4)

A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G C G T A
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.5 +/- 8.4bp
Average Position of motif in Background35.4 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCAGCAAAG
GGTCTGGCAT-----
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCTGGCAGCAAAG
TTTGGCGGGAAA-
 A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCTGGCAGCAAAG
TGAGTCAGCA---
 A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGCAGCAAAG
TTTTGGCGGGAAAA
 A C G T A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCAGCAAAG--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCTGGCAGCAAAG-
---GTCAGCANNTN
 A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCAGCAAAG
TGTCTGDCACCT---
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCTGGCAGCAAAG
-CWGGCGGGAA--
 A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTGGCAGCAAAG
CTTGGCAA-----
 A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTGGCAGCAAAG
TTTGGCGCCAAA-
 A C G T A G T C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T