Information for 6-GCATGTGACA (Motif 9)

C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
Reverse Opposite:
C A G T A C T G A G C T G T A C G T C A A G T C C T G A A C G T C T A G A G T C
p-value:1e-11
log p-value:-2.690e+01
Information Content per bp:1.840
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif91.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets50.9 +/- 27.4bp
Average Position of motif in Background47.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGACA
RTCATGTGAC-
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGACA
GTCATGTGACC
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGACA
GCCACGTGACC
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GCATGTGACA
NCACGTGACN
 C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCATGTGACA
ACCACGTGAC-
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGACA
KCCACGTGAC-
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCATGTGACA
GGCACGTGNC-
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGACA
ATCACGTGAC-
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGACA
GTCACGTGAC-
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGACA
ATCACGTGAC-
 A C G T C T A G A G T C G T C A G A C T A C T G A C G T A C T G C T G A A G T C G T C A
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T