Information for 7-CACKGCWCAGCGTCTC (Motif 19)

A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
Reverse Opposite:
A T C G G T C A A C T G C T G A A G T C A C T G A G T C A C G T A C T G G C A T T A C G G T A C G T C A A C T G A C G T A T C G
p-value:1e-7
log p-value:-1.805e+01
Information Content per bp:1.785
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 23.7bp
Average Position of motif in Background27.6 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CACKGCWCAGCGTCTC
-----CACAGN-----
 A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CACKGCWCAGCGTCTC
-------CAGCC----
 A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACKGCWCAGCGTCTC
TCNCTTTACAGCGNNNT
 A C G T A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CACKGCWCAGCGTCTC
TCNNTTTACAGCGNNNT
 A C G T A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CACKGCWCAGCGTCTC
TCNNTTTACAGCGNNNT
 A C G T A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CACKGCWCAGCGTCTC
GARTGGTCATCGCCC-
 A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CACKGCWCAGCGTCTC
----DCTCAGCAGG--
 A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CACKGCWCAGCGTCTC
-----GTCAGCANNTN
 A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CACKGCWCAGCGTCTC
----NGTCAGCANTTT
 A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CACKGCWCAGCGTCTC-
-----AGCAGCTGCTNN
 A T G C G T C A A G T C C A G T A C T G A G T C C G T A A G T C C G T A A C T G A G T C C T A G A G C T A G T C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C