Information for 11-TCAWGYGGSAGGS (Motif 15)

A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C A C G T A T G C A G T C A G T C C T A G A G T C C G A T A C G T A C T G C G T A
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 28.6bp
Average Position of motif in Background19.8 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCAWGYGGSAGGS
AANTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAWGYGGSAGGS
NTCAAGTGGN----
 A C G T A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCAWGYGGSAGGS
GGTCACGTGG-----
 A C G T A C G T A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCAWGYGGSAGGS
NTCAAGTGG-----
 A C G T A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCAWGYGGSAGGS
--GGGCGGGAAGG
 A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCAWGYGGSAGGS
NANTTTCAAGTGGTTAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:7
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------TCAWGYGGSAGGS
NGTGTTCAVTSAAGCGKAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCAWGYGGSAGGS
---GGCGGGAARN
 A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCAWGYGGSAGGS
AAATTCAAGTGGNTTN-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T

Mycn/MA0104.3/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCAWGYGGSAGGS
-CACGTGGC----
 A C G T A G T C G T C A C G T A A C T G A G T C C T A G A C T G T A C G C G T A A C T G A C T G A T G C
A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T