Information for 2-GGGAAHTGTAGTC (Motif 3)

A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C
Reverse Opposite:
T C A G G T C A A G T C A G C T G T C A A T G C T G C A C A T G G A C T A G C T A G T C A G T C A G T C
p-value:1e-18
log p-value:-4.360e+01
Information Content per bp:1.770
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.63%
Number of Background Sequences with motif164.5
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets47.7 +/- 24.5bp
Average Position of motif in Background40.6 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGGAAHTGTAGTC
GGGAATTGTAGT-
 A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.85
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAAHTGTAGTC
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.82
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAAHTGTAGTC
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGAAHTGTAGTC
TGGGGA---------
 A C G T A C G T A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGAAHTGTAGTC
TGGAACAGMA---
 A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAHTGTAGTC
CSTGGGAAAD------
 A C G T A C G T A C G T A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGGAAHTGTAGTC
GGCGGGAARN------
 A C G T A C G T A C G T A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGAAHTGTAGTC-----
-NNANTGGTGGTCTTNNN
 A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGGAAHTGTAGTC--
---NNHTGTGGTTWN
 A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGGAAHTGTAGTC--
-----CTGTGGTTTN
 A C T G A C T G C T A G C T G A C T G A G T A C A C G T A T C G A C G T C T G A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G