Information for 8-GCAGGAAAAACTT (Motif 11)

T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
Reverse Opposite:
T G C A T C G A T A C G G A C T G A C T A G C T A C G T A C G T T G A C G A T C G C A T A C T G A G T C
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.664
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif66.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets40.4 +/- 17.2bp
Average Position of motif in Background46.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd9/MA0913.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCAGGAAAAACTT
GCAATAAAAA---
 T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAGGAAAAACTT
--TGGAAAA----
 T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAGGAAAAACTT
GAAAMTGAAACT-
 T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAGGAAAAACTT
GGTAATAAAAA---
 A C G T T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCAGGAAAAACTT
AAGCCATAAAA----
 A C G T A C G T T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAGGAAAAACTT-
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGGAAAAACTT
GTCATAAAAN---
 T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCAGGAAAAACTT
AGAGCCATAAAATTCG
 A C G T A C G T A C G T T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGGAAAAACTT
GAAASYGAAASY-
 T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGGAAAAACTT
CCAATAAAAA---
 T C A G T G A C C G T A C T A G A C T G G T C A C G T A C T G A C T G A C T G A A G T C A G C T A C G T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T