Information for 7-GCGGAGCTGTGGCGTC (Motif 19)

A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A G T A C A C T G A G T C A T G C G C T A A G T C C G T A A C T G A T G C A C G T A G T C G T A C A C T G A G T C
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.921
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 22.1bp
Average Position of motif in Background54.2 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCTGTGGCGTC
-CGGAGC---------
 A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCTGTGGCGTC
-CGCAGCTGCG-----
 A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCGGAGCTGTGGCGTC
-----GCTGTG-----
 A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCGGAGCTGTGGCGTC
GCGGAGGTGTCGCCTC
 A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCTGTGGCGTC
RGKGGGCGGAGC---------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCGGAGCTGTGGCGTC
-----GCTGTGGTTT-
 A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCGGAGCTGTGGCGTC
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCGGAGCTGTGGCGTC
----GTCTGTGGTTT-
 A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:GCGGAGCTGTGGCGTC-
---------TGACGTCA
 A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCGGAGCTGTGGCGTC
NNGCAGCTGTC-----
 A C T G A G T C A C T G A C T G C G T A T A C G A G T C A C G T A C T G C G A T A T C G A C T G G T A C A C T G A C G T A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T