p-value: | 1e-8 |
log p-value: | -2.048e+01 |
Information Content per bp: | 1.865 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.22% |
Number of Background Sequences with motif | 35.2 |
Percentage of Background Sequences with motif | 0.08% |
Average Position of motif in Targets | 54.1 +/- 30.1bp |
Average Position of motif in Background | 47.8 +/- 26.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GATCCTAACC-- -NNACTTACCTN |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GATCCTAACC---- ACTATGCCAACCTACC |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GATCCTAACC- GATAACATCCTAGTAG |
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Hic1/MA0739.1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GATCCTAACC -ATGCCAACC |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GATCCTAACC- ---GCTAATCC |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GATCCTAACC-- TATGCWAATBAV |
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GSC/MA0648.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GATCCTAACC--- ---GCTAATCCCC |
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PB0185.1_Tcf1_2/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GATCCTAACC------- ---NNTAATCCNGNCNN |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GATCCTAACC-- ----YTAATCCY |
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GSC2/MA0891.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GATCCTAACC--- ---CCTAATCCGC |
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