Information for 13-TYTCGCCCCGCCC (Motif 9)

A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G A C T G G T A C C T A G A C T G C T A G T A C G T G A C C A T G C T G A C T A G T G C A
p-value:1e-14
log p-value:-3.227e+01
Information Content per bp:1.765
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif339.4
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets52.5 +/- 24.5bp
Average Position of motif in Background51.5 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.83
Offset:4
Orientation:forward strand
Alignment:TYTCGCCCCGCCC-
----GCCCCGCCCC
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.82
Offset:4
Orientation:forward strand
Alignment:TYTCGCCCCGCCC--
----GCCCCGCCCCC
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.80
Offset:3
Orientation:forward strand
Alignment:TYTCGCCCCGCCC--
---GGCCCCGCCCCC
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TYTCGCCCCGCCC---
--NAGCCCCGCCCCCN
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:TYTCGCCCCGCCC-
----GCCCCACCCA
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:TYTCGCCCCGCCC---
----GCTCCGCCCMCY
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.78
Offset:4
Orientation:forward strand
Alignment:TYTCGCCCCGCCC------
----GCCCCGCCCCCTCCC
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TYTCGCCCCGCCC----
--NRGCCCCRCCCHBNN
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:TYTCGCCCCGCCC-
----GCCMCRCCCH
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TYTCGCCCCGCCC----
-CTATCCCCGCCCTATT
 A C G T A G C T A G C T G A T C A C T G A T G C G A T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T