Information for 11-CTGTTACAGCGGAATA (Motif 20)

A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A
Reverse Opposite:
A C G T T G C A A G C T A C G T A G T C A G T C C A T G A G T C A C G T A T C G A G C T T G C A G C T A A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.338e+01
Information Content per bp:1.888
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 30.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTACAGCGGAATA
TCNCTTTACAGCGNNNT-
 A C G T A C G T A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTACAGCGGAATA
TCNNTTTACAGCGNNNT-
 A C G T A C G T A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTACAGCGGAATA
TCNNTTTACAGCGNNNT-
 A C G T A C G T A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CTGTTACAGCGGAATA
-------AGAGGAA--
 A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTGTTACAGCGGAATA-
-------NNTGGAAANN
 A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTGTTACAGCGGAATA
-------ACCGGAAG-
 A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CTGTTACAGCGGAATA-
-------AATGGAAAAT
 A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTGTTACAGCGGAATA-
------AAGAGGATTAG
 A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0126.1_Obox6/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CTGTTACAGCGGAATA---
----AAAAACGGATTATTG
 A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTGTTACAGCGGAATA-----
----TGAACCGGATTAATGAA
 A G T C C G A T A C T G C G A T A C G T C T G A A T G C C G T A A C T G G T A C A C T G A C T G C G T A C T G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A