Information for 9-CWGCCACCWSGYKRAG (Motif 10)

A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C G T A C T C G A A G T C A T G C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
p-value:1e-12
log p-value:-2.976e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 22.0bp
Average Position of motif in Background53.7 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CWGCCACCWSGYKRAG
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CWGCCACCWSGYKRAG-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CWGCCACCWSGYKRAG-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CWGCCACCWSGYKRAG
--NNCACCTGNN----
 A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CWGCCACCWSGYKRAG
-TGACACCT-------
 A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CWGCCACCWSGYKRAG
--ACCACCTGTT----
 A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CWGCCACCWSGYKRAG
CTGTCTGTCACCT-------
 A C G T A C G T A C G T A C G T A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CWGCCACCWSGYKRAG
--GCCATCTGTT----
 A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CWGCCACCWSGYKRAG
TGTCTGDCACCT-------
 A C G T A C G T A C G T A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CWGCCACCWSGYKRAG
ATGCCAACC-------
 A G T C G C A T A C T G G T A C A G T C G T C A A G T C A G T C C G A T A T C G A C T G A G C T A C T G C T A G C G T A C T A G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T