Information for 1-ARNTCTCGCGAGA (Motif 1)

G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A
Reverse Opposite:
A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A T G C G A C T C G A T
p-value:1e-541
log p-value:-1.246e+03
Information Content per bp:1.651
Number of Target Sequences with motif399.0
Percentage of Target Sequences with motif47.05%
Number of Background Sequences with motif415.2
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets52.5 +/- 21.6bp
Average Position of motif in Background46.3 +/- 43.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:forward strand
Alignment:ARNTCTCGCGAGA
-ATTCTCGCGAGA
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A
A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-ARNTCTCGCGAGA-
NAGNTCTCGCGAGAN
 A C G T G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:ARNTCTCGCGAGA---
-GTTCTCGCGAGANCC
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A C G T A C G T A C G T
A C G T T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

ZBED1/MA0749.1/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:forward strand
Alignment:ARNTCTCGCGAGA--
--CTATCGCGACATA
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A C G T A C G T
A C G T A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ARNTCTCGCGAGA
--GGCACGTGCC-
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A
A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ARNTCTCGCGAGA-
--TTCGCGCGAAAA
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A C G T
A C G T A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ARNTCTCGCGAGA----
-----TGGCGGGAAAHB
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ARNTCTCGCGAGA---
------GGCGGGAARN
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ARNTCTCGCGAGA---
-----GGGCGGGAAGG
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ARNTCTCGCGAGA---
------GGCGGGAAAH
 G C T A C T G A T A C G A G C T T G A C A G C T A G T C C T A G A G T C A C T G T C G A A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T