Information for 9-GCTATCTCAGTCT (Motif 10)

A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C G T A C T G C G T A A C T G C T G A A C G T C T G A A C T G A G T C
p-value:1e-8
log p-value:-2.019e+01
Information Content per bp:1.927
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 32.0bp
Average Position of motif in Background52.1 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCTATCTCAGTCT
NNNCTGATATCTCNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTATCTCAGTCT----
GCAACCTCATTATNNNN
 A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTATCTCAGTCT-
ACCACTCTCGGTCAC
 A C G T A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

POL002.1_INR/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCTATCTCAGTCT-
------TCAGTCTT
 A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTATCTCAGTCT-
AGTATTCTCGGTTGC
 A C G T A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0127.1_Gata6_2/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCTATCTCAGTCT
GCGGCGATATCGCAGCG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCTATCTCAGTCT--
-------CTGTCTGG
 A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCTATCTCAGTCT-
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTATCTCAGTCT
GCTGASTCAGCA-
 A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTATCTCAGTCT
YSTTATCT------
 A C G T A C T G A G T C A G C T C G T A A G C T A G T C G A C T A G T C G T C A A C T G A C G T A G T C C G A T
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T