Information for 6-TGATCACAAGTTA (Motif 5)

C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A
Reverse Opposite:
A C G T G T C A C G T A A T G C C G A T A G C T C T A G A C G T A T C G C T G A A C G T A T G C C G T A
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.813
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 13.6bp
Average Position of motif in Background57.6 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGATCACAAGTTA--
-----ACTAGTTAAC
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGATCACAAGTTA
--AACATATGTT-
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A
A C G T A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGATCACAAGTTA
--ACCATATGTT-
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGATCACAAGTTA-
-----AAAAGTCAA
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGATCACAAGTTA--
AGATGKDGAGATAAG
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGATCACAAGTTA
---NNATAAGGNN
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A
A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGATCACAAGTTA
-GGTCACGTGG--
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A
A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGATCACAAGTTA---
-TATCATAATTAAGGA
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGATCACAAGTTA
--GTCACGTGGT-
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGATCACAAGTTA
-NAACATATGTTT
 C G A T A T C G G T C A A G C T A T G C C G T A A G T C C T G A C G T A A T C G A C G T A C G T C G T A
A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T