Information for 11-GTTCAMRGCTNTTCTG (Motif 18)

C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
Reverse Opposite:
A T G C C G T A T A C G C G T A G T C A C T A G C G T A A C T G A T G C G A C T A C T G A C G T C T A G C G T A C T G A A G T C
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.718
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.2 +/- 24.8bp
Average Position of motif in Background52.7 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTCAMRGCTNTTCTG
-TTCACACCTT-----
 C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTTCAMRGCTNTTCTG
--TCACACCT------
 C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTCAMRGCTNTTCTG
TTTCACACCT------
 C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTCAMRGCTNTTCTG
CTTCACACCTA-----
 C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTCAMRGCTNTTCTG
GTATTGACAGCTNNTT--
 A C G T A C G T C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTCAMRGCTNTTCTG
--TCACACCT------
 C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTTCAMRGCTNTTCTG
NTTTTCACACCTT-----
 A C G T A C G T C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTTCAMRGCTNTTCTG
NNTTTTCACACCTTNNN--
 A C G T A C G T A C G T C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTCAMRGCTNTTCTG
-TTMACACCTT-----
 C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTCAMRGCTNTTCTG
--TCACACCT------
 C T A G A G C T A C G T A G T C G T C A G T A C C T G A A T C G A G T C A C G T G A T C C A G T A C G T A T G C A C G T T A C G
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T