Information for 9-ARAACASAAACASTTG (Motif 14)

C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A T A G C A C G T A C T G A C G T A G C T A C G T T A C G A C G T A T C G G C A T A C G T A G C T A C G T
p-value:1e-11
log p-value:-2.554e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 13.2bp
Average Position of motif in Background60.3 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ARAACASAAACASTTG-
YTAATTRAWWCCAGATGT
 A C G T C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ARAACASAAACASTTG
GCAAAACATTACTA----
 A C G T A C G T C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ARAACASAAACASTTG
GAAAMTGAAACT----
 C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ARAACASAAACASTTG
GAGAACCGAAACTG---
 A C G T C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ARAACASAAACASTTG----
----GAAGAACAGGTGTCCG
 C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:ARAACASAAACASTTG-
-------NAACAGCTGT
 C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:ARAACASAAACASTTG-
-------AAGCACATGG
 C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.54
Offset:8
Orientation:forward strand
Alignment:ARAACASAAACASTTG
--------ACCACGTG
 C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ARAACASAAACASTTG-
-------NAACAGCTGG
 C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.54
Offset:8
Orientation:forward strand
Alignment:ARAACASAAACASTTG
--------AACAGCTG
 C G T A C T G A C G T A C G T A T A G C G T C A A T C G G T C A C T G A T G C A G T A C C G T A A T C G G A C T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G