Information for 4-WGTGAGAAAATCTCAS (Motif 6)

G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
Reverse Opposite:
A T C G A C G T A C T G C T G A A T C G T C G A C G A T A C G T G A C T A G C T A G T C A G C T G T A C C G T A A T G C C G A T
p-value:1e-18
log p-value:-4.244e+01
Information Content per bp:1.695
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.7 +/- 29.0bp
Average Position of motif in Background54.7 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:WGTGAGAAAATCTCAS
CSTGGGAAAD------
 G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----WGTGAGAAAATCTCAS
GAAAAGGTGTGAAAATT----
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----WGTGAGAAAATCTCAS
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WGTGAGAAAATCTCAS
AGGTGTGAAM-------
 A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WGTGAGAAAATCTCAS
AAGGTGTGAAAAT-----
 A C G T A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-WGTGAGAAAATCTCAS
AGGTGTGAAA-------
 A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--WGTGAGAAAATCTCAS
AAGGTGTKAA--------
 A C G T A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-WGTGAGAAAATCTCAS
AGGTGTTAAT-------
 A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----WGTGAGAAAATCTCAS
NCTANGTCAGCAAATTT---
 A C G T A C G T A C G T A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--WGTGAGAAAATCTCAS
AAGGTGTGAA--------
 A C G T A C G T G C T A A T C G C G A T A C T G C T G A C T A G C T G A C G T A T G C A G C T A A G C T A T G C G A C T G T A C T G C A T A G C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T