Information for 12-TAAATTTAGC (Motif 28)

G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C
Reverse Opposite:
C A T G A T G C G C A T C T G A T C G A C G T A G C A T G C A T A C G T C T G A
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.655
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.89%
Number of Background Sequences with motif707.5
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets44.9 +/- 25.2bp
Average Position of motif in Background48.2 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TAAATTTAGC--
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAAATTTAGC
GCTAAAAATAGC
 A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAAATTTAGC
DCYAAAAATAGM
 A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAAATTTAGC
KCCAAAAATAGC
 A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAAATTTAGC
GCTATAAATAGC
 A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAAATTTAGC
TCTAAAAATAGA
 A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TAAATTTAGC-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAAATTTAGC
ACTATAAATAGA
 A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

PB0176.1_Sox5_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAAATTTAGC--
NNCTNAATTATGANN
 A C G T A C G T A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAAATTTAGC
CCATATATGG-
 A C G T G A C T T G C A C G T A C G T A G C A T A G C T G A C T C G T A T A C G G T A C
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T