Information for 12-ACTACACTRAWWY (Motif 17)

C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
Reverse Opposite:
C T A G C G A T C G A T A C G T A G T C C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G C T
p-value:1e-11
log p-value:-2.554e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 22.2bp
Average Position of motif in Background46.4 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACTACACTRAWWY-
NANTTCATTGAATTA
 A C G T C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTACACTRAWWY
GCGACCACACTG----
 A C G T A C G T A C G T C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTACACTRAWWY
SSAATCCACANN---
 A C G T A C G T C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACTACACTRAWWY
--ACCACTTAA--
 C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ACTACACTRAWWY
-MRSCACTYAA--
 C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ACTACACTRAWWY
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTACACTRAWWY
NWAACCACADNN----
 A C G T A C G T A C G T C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACTACACTRAWWY-
AACGAAACCGAAACT
 A C G T C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACTACACTRAWWY
--ACCACTTAA--
 C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACTACACTRAWWY
---GCACTTAA--
 C T G A A G T C A C G T C G T A A G T C C G T A A G T C A C G T C T A G C G T A C G T A C G T A A G T C
A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T