Information for 6-TTTCTCACCC (Motif 7)

C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C
Reverse Opposite:
C A T G A C T G C T A G A G C T A C T G C T G A C T A G C G T A G T C A G C T A
p-value:1e-14
log p-value:-3.385e+01
Information Content per bp:1.694
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.76%
Number of Background Sequences with motif1179.6
Percentage of Background Sequences with motif2.45%
Average Position of motif in Targets45.2 +/- 26.1bp
Average Position of motif in Background49.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-TTTCTCACCC
HTTTCCCASG-
 A C G T C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTCACCC----
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTTCTCACCC
TTTCACACCT
 C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTCACCC-
NTTTTCACACCTT
 A C G T A C G T C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTTCTCACCC
KTTCACACCT
 C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTTCTCACCC-
TTTCACACCTN
 C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTTCTCACCC-
-TTMACACCTT
 C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TTTCTCACCC
ATTAACACCT
 C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTTCTCACCC-
-TTCACACCTT
 C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTTCTCACCC
--TCACACCT
 C G A T A C G T C G A T A G T C G A C T A G T C C T G A A G T C T G A C G T A C
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T