Information for 11-CTGAGGTCTAGAC (Motif 15)

A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C T G A A C T G C G T A G T A C A G T C A C G T A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.274e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 26.8bp
Average Position of motif in Background48.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CTGAGGTCTAGAC-
----TGTCTAGACG
 A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGAGGTCTAGAC--
BCNGGTTCTAGANCN
 A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGTCTAGAC---
CTAAGGTTCTAGATCAC
 A C G T A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CTGAGGTCTAGAC--
-------CCAGACAG
 A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CTGAGGTCTAGAC----
-------CCAGACRSVB
 A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CTGAGGTCTAGAC--
-------BCAGACWA
 A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGAGGTCTAGAC------
--CAAATCCAGACATCACA
 A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGTCTAGAC
GTCTGTGGTTT----
 A C G T A C G T A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGTCTAGAC
GCTGTGGTTT----
 A C G T A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGAGGTCTAGAC
CTGTGGTTTN---
 A G T C A C G T A C T G G T C A A C T G A C T G A C G T G T A C A G C T C G T A A C T G G T C A A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T