Information for 9-WAACSMSTTYKAC (Motif 11)

C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C
Reverse Opposite:
T A C G A C G T G T A C C T G A G T C A C G T A A T C G A C G T A T C G C T A G A C G T A C G T C G A T
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.800
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 26.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-WAACSMSTTYKAC
NAAACCGGTTTT--
 A C G T C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WAACSMSTTYKAC
AAACCGGTTT---
 C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WAACSMSTTYKAC-------
AAACYKGTTWDACMRGTTTB
 C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----WAACSMSTTYKAC
GANGTTAACTAGTTTNN-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--WAACSMSTTYKAC-
TTTTACGACTTTCCAT
 A C G T A C G T C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--WAACSMSTTYKAC--
CATAACCACTTAACAAC
 A C G T A C G T C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0131.1_Gmeb1_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-WAACSMSTTYKAC--
TNAACGACGTCGNCCA
 A C G T C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--WAACSMSTTYKAC
GTTAACTAGN-----
 A C G T A C G T C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-WAACSMSTTYKAC--
TAAGCCACTTGAATTT
 A C G T C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----WAACSMSTTYKAC
NNANTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A T G C G T C A A T G C A C G T A C G T A G C T A C T G G T C A A T G C
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A