Information for 17-GTCACTGGTCTTGTGA (Motif 28)

A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A
Reverse Opposite:
A G C T A G T C C T G A A T G C C G T A C T G A A C T G G T C A A G T C G T A C C G T A C T A G G C A T C T A G C T G A A T G C
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.775
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.3 +/- 24.4bp
Average Position of motif in Background49.6 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GTCACTGGTCTTGTGA-
-------RTCATGTGAC
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTCACTGGTCTTGTGA
-NNACTTGCCTT----
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTCACTGGTCTTGTGA
TCACCTCTGGGCAG----
 A C G T A C G T A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTCACTGGTCTTGTGA
NTGCCCTTGGGCGN----
 A C G T A C G T A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GTCACTGGTCTTGTGA--
-------GTCATGTGACC
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTCACTGGTCTTGTGA-
-NNATTGGACTTTNGNN
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TFEC/MA0871.1/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GTCACTGGTCTTGTGA-
-------NTCACGTGAT
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GTCACTGGTCTTGTGA-
-------GTCACGTGAT
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GTCACTGGTCTTGTGA
--CCTTTGTTTT----
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GTCACTGGTCTTGTGA
-----TTGACTTTT--
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A G C T A C G T A T C G A G C T A C T G T C G A
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T