Information for 20-GGGAGCTCAT (Motif 34)

A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G G T C A A C T G A G T C A C G T A G T C A G T C A G T C
p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.942
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.3 +/- 28.7bp
Average Position of motif in Background70.4 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGAGCTCAT
CGGAGC----
 A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGAGCTCAT--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGGAGCTCAT---
---AGCTCATTAT
 A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGAGCTCAT-
RGGGCACTAACY
 A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGAGCTCAT
GGGAGGACNG
 A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGAGCTCAT-------
NNNACCTCATTATCNTN
 A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGAGCTCAT-------
GCAACCTCATTATNNNN
 A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGAGCTCAT
-AGRGGTCA-
 A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGAGCTCAT
TGGGGA------
 A C G T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGAGCTCAT-
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C G T A G T C C G T A A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T