Information for 5-AAACCACAAG (Motif 13)

G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G
Reverse Opposite:
G T A C A G C T A C G T A C T G C A G T C T A G C T A G A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.097e+01
Information Content per bp:1.716
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif7.58%
Number of Background Sequences with motif343.7
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets50.1 +/- 26.0bp
Average Position of motif in Background51.5 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:AAACCACAAG
AAACCACANN
 G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAAG
NAAACCACAG-
 A C G T G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:AAACCACAAG-
AAACCACAGAN
 G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AAACCACAAG
AAACCGCAAA
 G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AAACCACAAG
AAACCGCAA-
 G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAAG-
NWAACCACADNN
 A C G T G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AAACCACAAG
AAACCACAGC
 G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAACCACAAG
TCCAATCCACA--
 A C G T A C G T A C G T G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAACCACAAG--
AACAAACAACAAGAG
 A C G T A C G T A C G T G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAAG-
GAAASYGAAASY
 A C G T G T C A G T C A T G C A A G T C G A T C G T C A T G A C G T C A C T G A C A T G A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T