Information for 12-CCAGAATGCA (Motif 7)

A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A
Reverse Opposite:
C A G T A C T G G T A C T G C A G A C T C A G T A T G C A G C T A C T G A C T G
p-value:1e-20
log p-value:-4.643e+01
Information Content per bp:1.775
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif5.94%
Number of Background Sequences with motif504.8
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets51.6 +/- 24.7bp
Average Position of motif in Background48.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAATGCA
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CCAGAATGCA---
TACCCACAATGCATTG
 A C G T A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAGAATGCA
DCTCAGCAGG--
 A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCAGAATGCA-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAATGCA
ATGCCAGACN---
 A C G T A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:-11
Orientation:forward strand
Alignment:-----------CCAGAATGCA
AACTACAATTCCCAGAATGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCAGAATGCA-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCAGAATGCA-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGAATGCA
TGCCCCAGGGCA
 A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGAATGCA
TGCCCCCGGGCA
 A C G T A C G T A G T C A G T C C T G A A T C G G T C A C T G A A C G T A C T G A G T C G T C A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A