Information for 10-CTGMCWGGCTTWTGAT (Motif 9)

A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A C G A T C G T A G T C A A C T G A G T C A G T C C G A T A C T G C A T G A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.896
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 30.7bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGMCWGGCTTWTGAT
VBTGWCAGCB-------
 A C G T A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTGMCWGGCTTWTGAT
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTGMCWGGCTTWTGAT-----
----AATCCCTTTGATCTATC
 A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGMCWGGCTTWTGAT
TTGCCAAG--------
 A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTGMCWGGCTTWTGAT-----
----ATTTCCTTTGATCTATA
 A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGMCWGGCTTWTGAT
TTGACAGC--------
 A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTGMCWGGCTTWTGAT
NNATTGACAGGTGCTT---
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:CTGMCWGGCTTWTGAT
----------TTTAAT
 A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CTGMCWGGCTTWTGAT--
------TNCCTTTGATGT
 A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTGMCWGGCTTWTGAT
TGAGTGACAGSC-------
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T A C G T G C A T A C G T A C T G G T C A A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T