Information for 5-AACAGAAACT (Motif 3)

C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T
Reverse Opposite:
C T G A T A C G A G C T G C A T G A C T A T G C C G A T T A C G A G C T A G C T
p-value:1e-16
log p-value:-3.892e+01
Information Content per bp:1.845
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.43%
Number of Background Sequences with motif300.1
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets48.1 +/- 26.9bp
Average Position of motif in Background50.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAAACT
GAAAMTGAAACT
 A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAAACT
GAAACTGAAACT
 A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---AACAGAAACT--
GGAAANTGAAACTNA
 A C G T A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AACAGAAACT-
GAGAACCGAAACTG
 A C G T A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----AACAGAAACT
TCGAAACCGAAACT
 A C G T A C G T A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AACAGAAACT
GRAASTGAAAST
 A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AACAGAAACT
GAAASYGAAASY
 A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AACAGAAACT--
ATAAACCGAAACCAA
 A C G T A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AACAGAAACT--
CAAAATCGAAACTAA
 A C G T A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AACAGAAACT
GAAAGTGAAAGT
 A C G T A C G T C T G A C T G A A T G C C G T A A T C G C T G A C G T A C T G A A T G C A G C T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T