Information for 18-CACGGACCGTGCA (Motif 25)

A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
Reverse Opposite:
A G C T A T C G G T A C G C T A A T G C C T A G A T C G A C G T A G T C A G T C T A C G A C G T C T A G
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.709
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif89.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets46.7 +/- 29.9bp
Average Position of motif in Background50.0 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACGGACCGTGCA
GTCACGCTCNCTGA-
 A C G T A C G T A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CACGGACCGTGCA
----GGACGTGC-
 A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:3
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CACGGACCGTGCA
AGGTCACGGAGAGGTCA
 A C G T A C G T A C G T A C G T A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CACGGACCGTGCA
---NNCGCGTGNN
 A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CACGGACCGTGCA-----
-AATCGCACTGCATTCCG
 A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CACGGACCGTGCA
--CGGAGC-----
 A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CACGGACCGTGCA
----RTACGTGC-
 A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

HES7/MA0822.1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CACGGACCGTGCA-
--TGGCACGTGCCA
 A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A A C G T
A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CACGGACCGTGCA
TAACGACACGTGC-
 A C G T A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CACGGACCGTGCA
TBGCACGCAA------
 A C G T A C G T A C G T A G T C G T C A A T G C C T A G T A C G G T C A T A G C G A T C T A C G C A G T A C T G A T G C C T G A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T