Information for 8-CAYCTGCTGC (Motif 16)

A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C
Reverse Opposite:
C T A G A G T C C G T A C A T G T A G C C G T A A C T G T C G A A C G T C T A G
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.773
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif383.2
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets53.6 +/- 32.0bp
Average Position of motif in Background50.4 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CAYCTGCTGC--
CCACCTGTTGCAT
 A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CAYCTGCTGC
SNGCACCTGCHS-
 A C G T A C G T A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CAYCTGCTGC--
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----CAYCTGCTGC--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CAYCTGCTGC
NCAGCTGCTG-
 A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CAYCTGCTGC
AGCAGCTGCTNN
 A C G T A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CAYCTGCTGC-
TGCAGCTGTCCCT
 A C G T A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CAYCTGCTGC
AACACCTGCT--
 A C G T A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CAYCTGCTGC
CAGCTGNT--
 A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CAYCTGCTGC
NVCAGCTGBBNN
 A C G T A C G T A G T C T G C A A G C T G T A C C G A T A T C G G T A C A C G T T C A G G A T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C