Information for 17-CTTAAGTAGCATCCAG (Motif 19)

A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G C G T A A C G T C T A G A T G C A C G T C G T A A G T C A C G T A C G T C T G A C T G A A C T G
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 30.0bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTAAGTAGCATCCAG
NNNTTAGGTAGCNTNT--
 A C G T A C G T A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTAAGTAGCATCCAG
NNTGTAGGTAGCANNT--
 A C G T A C G T A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTTAAGTAGCATCCAG
-TTAATTAG-------
 A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTAAGTAGCATCCAG
-BTVATTWGCATA---
 A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTTAAGTAGCATCCAG
-TTATGTAACAT----
 A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTAAGTAGCATCCAG
TNTAATTTGCATANNN
 A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTAAGTAGCATCCAG
-TTAAGTGGN------
 A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTAAGTAGCATCCAG
-TTAAGTGGT------
 A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTTAAGTAGCATCCAG
AATTAATTAGT------
 A C G T A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LHX2/MA0700.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTAAGTAGCATCCAG
NNTAATTAGN------
 A G T C A G C T A G C T C G T A C G T A C T A G A C G T C G T A T A C G A G T C G T C A A C G T A G T C A G T C C G T A A C T G
T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T