Information for 14-CAGTVATGGTGCTACC (Motif 14)

G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
Reverse Opposite:
C A T G A C T G A G C T C T G A A C T G T A G C G T C A A G T C A G T C C G T A A C G T A G T C C G T A A G T C A C G T C A T G
p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 25.4bp
Average Position of motif in Background34.1 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAGTVATGGTGCTACC--
---AGATGCTRCTRCCHT
 G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGTVATGGTGCTACC
--GTCATN--------
 G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTVATGGTGCTACC
NNNNTGCCAGTGATTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGTVATGGTGCTACC
-GKTAATGR-------
 G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGTVATGGTGCTACC
-AGTCACGC-------
 G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAGTVATGGTGCTACC
ACTYKNATTCGTGNTACTTC-
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGTVATGGTGCTACC
CACTAATT--------
 G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAGTVATGGTGCTACC
--NTAATTGN------
 G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAGTVATGGTGCTACC
--NTAATTGG------
 G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGTVATGGTGCTACC
-AGTAATTAAC-----
 G T A C C G T A A C T G A C G T T A C G G T C A A C G T A C T G C T A G A C G T A T C G G T A C A G C T C T G A A G T C G T A C
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T A C G T A C G T A C G T A C G T