Information for 11-AATGRWCCCTCAT (Motif 11)

G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T
Reverse Opposite:
C T G A A C G T T C A G C G T A A C T G C A T G A C T G C G A T A G T C A G T C C G T A A C G T A C G T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.792
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 29.4bp
Average Position of motif in Background41.9 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AATGRWCCCTCAT-
---GTACCCGCATN
 G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T A C G T
A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AATGRWCCCTCAT-
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AATGRWCCCTCAT-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AATGRWCCCTCAT-
----TACCCGCATN
 G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AATGRWCCCTCAT----
-TCGTACCCGCATCATT
 G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T A C G T A C G T A C G T A C G T
A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AATGRWCCCTCAT
ACAAAGGNBCCT---
 A C G T A C G T G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AATGRWCCCTCAT-
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AATGRWCCCTCAT
--TGACCYCT---
 G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AATGRWCCCTCAT-
ANNNATGATACCCCATC
 A C G T A C G T A C G T G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AATGRWCCCTCAT
GKTAATGR--------
 A C G T A C G T A C G T G T C A C G T A A C G T A C T G T C A G C G T A A G T C G A T C A G T C C G A T A G T C G T C A A G C T
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T