Information for 9-AACCRTACCAACT (Motif 8)

C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T
Reverse Opposite:
C G T A A C T G A C G T A C G T A T C G A C T G A G C T C G T A A G T C C T A G C T A G A C G T A C G T
p-value:1e-13
log p-value:-2.997e+01
Information Content per bp:1.818
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.9 +/- 25.5bp
Average Position of motif in Background32.7 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACCRTACCAACT--
TACCATAGCAACGGT
 C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AACCRTACCAACT------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AACCRTACCAACT------
----CGACCAACTGCCGTG
 C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AACCRTACCAACT-
--SCCTAGCAACAG
 C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AACCRTACCAACT
----ATGCCAACC
 C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AACCRTACCAACT-------
----CGACCAACTGCCATGC
 C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Vdr/MA0693.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AACCRTACCAACT-
TGAACTCNATGAACTC
 A C G T A C G T C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AACCRTACCAACT
---GGTGCCAAGT
 C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AACCRTACCAACT----
-ACTATGCCAACCTACC
 C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AACCRTACCAACT---
CGACCCAATCAACGGTG
 A C G T C G T A C G T A A G T C A G T C C T A G G A C T C T G A A G T C A T G C G T C A C G T A A G T C C G A T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G