Information for 6-TTGGGTCASAGGAGGG (Motif 3)

G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
Reverse Opposite:
T A G C A G T C A G T C A C G T A G T C A G T C A C G T A T C G A C G T A C T G C G T A G A T C A G T C G T A C G T C A C G T A
p-value:1e-13
log p-value:-3.091e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 23.1bp
Average Position of motif in Background54.0 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGGGTCASAGGAGGG
-TGGGGCAAAGGTCA-
 G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTGGGTCASAGGAGGG
AGGGGTCAGAGGTCA-
 G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TTGGGTCASAGGAGGG
------AACAGGAAGT
 G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGGGTCASAGGAGGG
GTAGGGCAAAGGTCA-
 G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGTCASAGGAGGG
NANAGATCAAAGGGNNN
 A C G T G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGGGTCASAGGAGGG
-TAGGGCAAAGGTCA-
 G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGGGTCASAGGAGGG
-GAGGTCAAAGGTCA-
 G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGTCASAGGAGGG
NNNAGATCAAAGGANNN
 A C G T G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTGGGTCASAGGAGGG
----GTCACATGAY--
 G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGGGTCASAGGAGGG
CAAAGGTCAAGGG----
 A C G T G C A T A C G T C A T G A C T G C T A G G C A T A G T C C G T A A T G C C G T A A C T G A C T G T C G A C T A G C T A G A T C G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T A C G T