Information for 17-AAAATGGCACTCT (Motif 15)

C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C G T A C T G A T G C T G A C C G T A A C G T A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 21.1bp
Average Position of motif in Background69.4 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAATGGCACTCT
GAAAAAATTGCAAGG-
 A C G T A C G T A C G T C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAATGGCACTCT
CAAGATGGCGGC--
 A C G T C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGGCACTCT----
AAAAATGGCGCCATTTTT
 A C G T C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAATGGCACTCT---
AAAATGGCGCCATTTT
 C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

SOX21/MA0866.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAATGGCACTCT-
AACAATGGTAGTGTT
 A C G T C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AAAATGGCACTCT
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAATGGCACTCT-
AACAATAACATTGTT
 A C G T C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

SOX4/MA0867.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAATGGCACTCT-
GAACAATTGCAGTGTT
 A C G T A C G T C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAAATGGCACTCT-
----MRSCACTYAA
 C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAAATGGCACTCT-
----AASCACTCAA
 C G T A C G T A C G T A G T C A A C G T A C T G A T C G A G T C C G T A A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A