Information for 15-TAACACTTTAAAT (Motif 13)

A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T G T C A
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.951
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.0 +/- 14.9bp
Average Position of motif in Background50.7 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAACACTTTAAAT--
ATAACCACTTGAAAATT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAACACTTTAAAT
-ACCACTTGAA--
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAACACTTTAAAT
--CCACTTGAA--
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TAACACTTTAAAT-
-----ATTTGAATT
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAACACTTTAAAT-
TAAGCCACTTGAAATT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAACACTTTAAAT
-ACCACTTAA---
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAACACTTTAAAT-
TAAGCCACTTGAATTT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAACACTTTAAAT
-ACCACTTAA---
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAACACTTTAAAT----
-AACACTGCACATTGTT
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

SOX4/MA0867.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAACACTTTAAAT----
-AACACTGCAATTGTTC
 A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C